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Technická 5
166 28 Prague 6 – Dejvice
IČO: 60461373 / VAT: CZ60461373

Czech Post certified digital mail code: sp4j9ch

Copyright: UCT Prague
Information provided by the Department of International Relations and the Department of R&D. Technical support by the Computing Centre. [paticka_odkaz_mail] => mailto:info@vscht.cz [zobraz_desktop_verzi] => [more_info] => [drobecky] => You are here: UCT PragueWeb PhD [aktualizovano] => Updated [autor] => Author [zobraz_mobilni_verzi] => [social_li_odkaz] => [dokumenty_kod] => [dokumenty_nazev] => [dokumenty_platne_od] => [dokumenty_platne_do] => [nepodporovany_prohlizec] => [den_kratky_6] => [novinky_kategorie_1] => [novinky_kategorie_2] => [novinky_kategorie_3] => [novinky_kategorie_4] => [novinky_kategorie_5] => [novinky_archiv_url] => [novinky_servis_archiv_rok] => [novinky_servis_nadpis] => [novinky_dalsi] => [den_kratky_2] => [archiv_novinek] => [cookie-policy-title] => Cookies settings [cookie-policy-info] =>

We value your privacy

This website store cookies which are necessary for the proper function of this website (strictly necessary) in your browser. With your consent, the website will also use and store in your browser other cookies for the purpose of anonymous analysis of website traffic (analytical) and for the personalization of advertising (marketing). You can withdraw or modify your consent at any time by opening the "Cookies settings" menu at the bottom of the website. You provide your consent to UCT Prague for the domain vscht.cz including 3rd level domains. Further information can be found on the Privacy Policy and Cookie Policy pages. [cookie-policy-necessary] => Necessary [cookie-policy-necessary-text] => These cookies are necessary for the website to function properly and therefore cannot be disabled. [cookie-policy-analytics] => Analytical [cookie-policy-analytics-text] => We use web analytics cookies to anonymously analyse website visits and usage. [cookie-policy-functional] => Functional [cookie-policy-functional-text] => [cookie-policy-button-accept-all] => Accept all [cookie-choose-handler] => Custom settings [cookie-choose-handler-send] => Save custom settings [cookie-reject-all-handler] => Accept only the necessary [cookie-policy-button-customize] => Cookies settings [cookie-policy-marketing] => Marketing [cookie-policy-marketing-text] => These cookies are used to evaluate advertising campaigns and personalize ads. [kalendar_nadpis] => Calendar [cely_kalendar] => All events ) [poduzel] => stdClass Object ( [50384] => stdClass Object ( [obsah] => [poduzel] => stdClass Object ( [50385] => stdClass Object ( [obsah] => [iduzel] => 50385 [canonical_url] => _clone_ [skupina_www] => Array ( ) [url] => [sablona] => stdClass Object ( [class] => [html] => [css] => [js] => [autonomni] => ) ) [50388] => stdClass Object ( [obsah] => [iduzel] => 50388 [canonical_url] => _clone_ [skupina_www] => Array ( ) [url] => [sablona] => stdClass Object ( [class] => [html] => [css] => [js] => [autonomni] => ) ) [50389] => stdClass Object ( [obsah] => [iduzel] => 50389 [canonical_url] => _clone_ [skupina_www] => Array ( ) [url] => [sablona] => stdClass Object ( [class] => [html] => [css] => [js] => [autonomni] => ) ) ) [iduzel] => 50384 [canonical_url] => _clone_ [skupina_www] => Array ( ) [url] => [sablona] => stdClass Object ( [class] => [html] => [css] => [js] => [autonomni] => ) ) [58015] => stdClass Object ( [obsah] => [poduzel] => stdClass Object ( [58016] => stdClass Object ( [nazev] => [seo_title] => PhD studies at UCT Prague [seo_desc] => [autor] => [autor_email] => [obsah] => [urlnadstranka] => [ogobrazek] => [pozadi] => [iduzel] => 58016 [canonical_url] => [skupina_www] => Array ( ) [url] => /home [sablona] => stdClass Object ( [class] => boxy [html] => [css] => [js] => $(function() { setInterval(function () { $('*[data-countdown]').each(function() { CountDownIt('#'+$(this).attr("id")); }); },1000); setInterval(function () { $('.homebox_slider:not(.stop)').each(function () { slide($(this),true); }); },5000); }); function CountDownIt(selector) { var el=$(selector);foo = new Date; var unixtime = el.attr('data-countdown')*1-parseInt(foo.getTime() / 1000); if(unixtime<0) unixtime=0; var dnu = 1*parseInt(unixtime / (3600*24)); unixtime=unixtime-(dnu*(3600*24)); var hodin = 1*parseInt(unixtime / (3600)); unixtime=unixtime-(hodin*(3600)); var minut = 1*parseInt(unixtime / (60)); unixtime=unixtime-(minut*(60)); if(unixtime<10) {unixtime='0'+unixtime;} if(dnu<10) {unixtime='0'+dnu;} if(hodin<10) {unixtime='0'+hodin;} if(minut<10) {unixtime='0'+minut;} el.html(dnu+':'+hodin+':'+minut+':'+unixtime); } function slide(el,vlevo) { if(el.length<1) return false; var leva=el.find('.content').position().left; var sirka=el.width(); var pocet=el.find('.content .homebox').length-1; var cislo=leva/sirka*-1; if(vlevo) { if(cislo+1>pocet) cislo=0; else cislo++; } else { if(cislo==0) cislo=pocet-1; else cislo--; } el.find('.content').animate({'left':-1*cislo*sirka}); el.find('.slider_puntiky a').removeClass('selected'); el.find('.slider_puntiky a.puntik'+cislo).addClass('selected'); return false; } function slideTo(el,cislo) { if(el.length<1) return false; var sirka=el.width(); var pocet=el.find('.content .homebox').length-1; if(cislo<0 || cislo>pocet) return false; el.find('.content').animate({'left':-1*cislo*sirka}); el.find('.slider_puntiky a').removeClass('selected'); el.find('.slider_puntiky a.puntik'+cislo).addClass('selected'); return false; } [autonomni] => 1 ) ) [75749] => stdClass Object ( [nazev] => Onboarding [seo_title] => Onboarding [seo_desc] => [autor] => [autor_email] => [obsah] =>

What is onboarding?

Onboarding is a key process of integrating new employees into the organisation, thereby enhancing both their professional, social, cultural and organisational integration. As a result, employees feel welcomed as part of the organisation and better prepared for the tasks ahead of them. The sooner the new employee feels welcome and fully informed, the better and quicker they will be able to contribute to the organisation successfully.

Onboarding procedures are common in the private sector but often absent in academic institutions. In particular for newly hired Early Career Researchers (ECR), namely PhD candidates, such procedures will strongly impact both their integration into the organisation and clarification of roles and responsibilities of all stakeholders involved in their programme. In order to maximize their impact, it is therefore important that onboarding procedures are approved and supported by supervisors and Postgraduate offices. While it has been shown that successful onboarding contributes to increased well-being and motivation, many ECRs often feel somewhat lost and poorly supported when entering academia, leading to doubt, insecurity and sometimes even an early abandonment of their research project.

UCT and onboarding

In collaboration with the PRIDE network (Professionals in Doctoral Education), a working group was formed with the aim of drafting a publication on onboarding, focusing for the first time on doctoral candidates and postdocs and their adaptation process at the university.

UCT Prague initially launched an extensive questionnaire to assess awareness of onboarding, whether and how many people have encountered it, and what they would welcome within the academic environment. After evaluating the questionnaire, meetings were held in the private sector with HR professionals. We wanted to verify how onboarding is conducted in private companies and how we can leverage their know-how and experiences in our context.

The collected materials and interviews with HR professionals were used to create an adaptation plan, which was piloted from September 2023 at three institutes of  UCT Prague. The resulting adaptation plan, which is part of this page, will serve the needs of UCT Prague supervisors who work with newly hired doctoral candidates. Furthermore, the adaptation plan will be utilized for the PRIDE network publication, serving as a foundation for other European universities.

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Zde se zobrazují boxy (ze složky phd-boxy)

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UCT Prague cooperates with partner universities in Europe on joint doctoral study programmes.

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What is a “Double-Degree” programme?

It is doctoral study programme that is leading to two diplomas from both home university as well as partner university. Student works on one dissertation, the study programmes are fully integrated between collaborating universities and include specialized courses at home university and one interdisciplinary at partner university. 

Each successful applicant signs individual contract about doctoral double degree based on his/her particular situation (research area, supervisor’s requirements, home university requirements etc.). The contract is signed between UCT Prague and student’s home university.

Requirements for doctoral double degree contract:

  • Student has to agree with two supervisors – one from the home university, one from UCT Prague
  • Student has to be accepted by his/her supervisor to PhD studies at UCT Prague
  • Student has to be accepted to PhD studies at his/her home university
  • UCT Prague and student’s home university have to have a joint double degree study programme (list of offered programmes below)

Contact persons at UCT Prague

First contact (study matter) - Contact person of each double degree study programme.

Second contact (general matter, information about the application proceedings)– Department of International Relations: international@vscht.cz

Finances

In terms of cooperation with partner universities no tuition is required. Students are expected to cover any additional costs themselves.

What are the advantages?

Besides improved employability of graduates, there is emphasis on research activity coupled with a possibility to lead small research groups. The program inherently strengthens professional language knowledge. There are possibilities to gain practical skills thanks to cooperation with partner companies such as Zentiva, Zeva, Contipro, Lonza Biotec or in practically oriented departments of Czech Academy of Sciences, where are practical traineeships available. Last but not least there is excellent support of students, including motivational scholarships.

Double degree programmes offered

There are 8 programmes at 4 faculties

FCT – Faculty of Chemical Technology

FET – Faculty of Environmental Technology

FBT – Faculty of Food and Biochemical Technology

FCE – Faculty of Chemical Engineering

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Microbiology

Microbiology

The purpose of the study programme is to train specialists with a comprehensive understanding of microbial populations, their activity, phylogenetic and metabolic diversity, mechanisms controlling targeted changes of their genetic information or chemical principles affecting the relationship within microbial communities. The study programme is based on the combination of various forms of tuition and laboratory research, with the main emphasis on independence, initiative and critical approach of students. Alumni of this study programme should be able to routinely use any of the acquired knowledge, skills and competences for industrial or other applications.

Careers

Alumni of this study programme should have a comprehensive microbiological, biochemical and engineering background that will enable them to fully understand the microbial world. They will dispose of deep theoretical insight as well as practical skills in all key areas of microbiology, including biochemistry of microorganisms, molecular biology, genetic engineering and other closely related fields. The alumni of the study programme will find employment in all areas of biotechnology, food, pharmaceutical or chemical industry, in clinical laboratories, in the field of environmental sciences and agriculture. Last but not least, the alumni should be highly competent to work in academia.

Programme Details

Study Language English
Standard study length 4 years
Form of study combined , full-time
Guarantor prof. Ing. Bc. Ondřej Uhlík, Ph.D.
Place of study Praha
Capacity 15 students
Programme code (national) P0511D130022
Programme Code (internal) AD301
Number of Ph.D. topics 4

Ph.D. topics for study year 2024/25

Interaction of Bordetella with Respiratory Epithelia

Granting Departments: Department of Biochemistry and Microbiology
Institute of Microbiology of the CAS, v.v.i.
Supervisor: RNDr. Jana Kamanová, Ph.D.

Annotation


The classical Bordetella species infect the respiratory tract of mammals. B. bronchiseptica induces chronic respiratory infections in various mammals, while the human-adapted species B. pertussis and B. parapertussis HU lead to an acute respiratory disease known as whooping cough or pertussis. These bacteria establish biofilms on both abiotic surfaces and within the respiratory tract, functioning as an immune evasion mechanism and a focal point for the development of novel antimicrobial agents. The objective of this PhD thesis is to unravel the signaling pathways underlying Bordetella colonization of respiratory epithelia and biofilm formation. The PhD candidate will employ an air-liquid interface model of human nasal epithelia and a microengineered biomimetic system, an organ-on-a-chip, combined with metabolomics, dual RNA-Seq and genetic engineering.
Contact supervisor Study place: Institute of Microbiology of the CAS, v.v.i.

The role of microorganisms in greenhouse gas production in forested peatlands of northern Europe

Granting Departments: Department of Biochemistry and Microbiology
Institute of Microbiology of the CAS, v.v.i.
Supervisor: Dr. Ing. RNDr. Petr Baldrian, Ph.D.

Annotation


Peatlands of Northern Europe are an important source of greenhouse gases (GHG) with a strong influence on global climate - methane, nitrous oxide and carbon dioxide. One of the approaches to limit GHG production is the drainage of peatlands and their afforestation. Although this land use change can somehow reduce GHG production, it still partly continues to depend on the management of forests. The fluxes of GHG are, however, also regulated by other factors, such as the seasonal activity of vegetation and microorganisms. Since microorganisms are responsible for GHG production in the soils of forested peatlands, they represent the key to the understanding of GHG production rates and factors that affect them. In this work, we will use field experiments in southern Finland, where GHG production is monitored and where the analysis of microbiome composition and function at different depths of peat can be thus linked to the observed ecosystem-level gas fluxes. This project will offer a combination of fieldwork, labwork and analysis of bioinformatic data. When successful, the results of the thesis should help to indicate what management of peatland forests has the highest potential to mitigate GHG emissions and increase the storage of carbon in forest soils.
Contact supervisor Study place: Institute of Microbiology of the CAS, v.v.i.

Exploring Respiratory Viral Entry: Comparative Insights from the Interactomes of Coronaviruses and Influenza A Viruses during Early Infection

Granting Departments: Department of Biochemistry and Microbiology
Institute of Organic Chemistry and Biochemistry of the CAS, v. v. i.
Supervisor: Mgr. Jan Weber, CSc.

Annotation


The entry of viruses into host cells is a crucial initial step, particularly for respiratory viruses with significant pandemic potential such as SARS-CoV-2 and influenza A virus. Analyzing the interactomes of coronaviruses and influenza A virus and comprehending the early interactions between viral and cellular proteins can provide valuable insights for developing targeted or broad-spectrum antiviral therapies. The main goal of this project is to understand the viral and cellular factors influencing the entry of respiratory viruses. We will employ several strains of coronaviruses and influenza A virus, known to exploit different entry routes into the host cell, and will compare their cellular interactome at the time of entry and during early post-entry events. From the identified cellular interacting partners, interesting candidates will be selected and their role in the virus life cycle analyzed. The student will learn how to work with cell cultures in biosafety level 3, perform proteomic and bioinformatic analyses, and conduct siRNA experiments for gene-knockdown in mammalian cells infected with various viruses. The proposed project will broaden our current knowledge about the early phase of infections of mammalian cells with respiratory viruses.
Contact supervisor Study place: Institute of Organic Chemistry and Biochemistry of the CAS, v. v. i.

Response of microbial soil community and microbe-mediated ecosystem processes to forest harvesting

Granting Departments: Department of Biochemistry and Microbiology
Institute of Microbiology of the CAS, v.v.i.
Supervisor: Dr. Ing. RNDr. Petr Baldrian, Ph.D.

Annotation


Forest harvesting is economically important but due to the ecological importance of forests, it also represents a dramatic event in the ecosystem development. While clearcutting is a common practice in the temperate and boreal forests, variable retention harvesting is an alternative silvicultural practice in which some portion of the pre-harvest stand is retained after harvest. The broad objective is to maintain structural and functional elements from the pre-harvest condition to promote rapid recovery of biodiversity and ecological functions in the regenerating stands compared to clearcut stands. Harvesting of trees has profound effects on ecosystem processes that are associated with changes in the quality and decreases in the quantity of plant C inputs into the surrounding soil, as well as effects on soil nutrient availability and microclimatic conditions. Harvested stands also offer the opportunity to study the effect of reduced primary production on soil processes. Forest harvesting is known to have major effects on the main symbiotic fungi living on the roots of temperate trees, ectomycorrhizae, however, little is known about harvesting effects on symbiotic arbuscular mycorhizal fungi and bacteria. This project proposes to analyse the short-term effects of forest harvesting on the activity and composition of soil microbial communities in forests with dominant ectomycorrhizal and arbuscular mycorrhizal symbiosis and those with mixed ECM/AM. Changes in ecosystem properties and functioning, such as decomposition and N cycling will be linked to the community composition of soil microbes and their transcriptional activity. The project should give a view of the temporary changes of forest stand manipulations as well as answer the response of individual groups of microbes. This is important both for the consideration of future forest management strategies and the predictions of forest management effects on the C balance of forest soils.
Contact supervisor Study place: Institute of Microbiology of the CAS, v.v.i.
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